Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein 40 precursor | CK234_03747 | Not Available | Positive | 4519707 - 4520780 | 38634.8 |
| 23s rrna (uridine(2479)-2'-o)-methyltransferase | CK234_03748 | Not Available | Negative | 4521113 - 4521868 | 27943.9 |
| putative outer membrane protein assembly factor, bama precursor-like | CK234_03749 | Not Available | Positive | 4521970 - 4524294 | 88990.3 |
| hypothetical protein | CK234_03750 | Not Available | Positive | 4524311 - 4524559 | 9624.58 |
| hypothetical protein | CK234_03751 | Not Available | Positive | 4524612 - 4525196 | 21886.3 |
| hypothetical protein | CK234_03752 | Not Available | Positive | 4525658 - 4525876 | 8572.49 |
| Trna-lys | Not Available | Not Available | Positive | 4526007 - 4526082 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 4526100 - 4526175 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 4526197 - 4526272 | Not Available |
| putative metallo-hydrolase, yycj-like | CK234_03756 | Not Available | Negative | 4526361 - 4527164 | 29856.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

