Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex, rnfabcdge type, b subunit | CK234_03737 | Not Available | Negative | 4509519 - 4510298 | 29051.1 |
| 50s ribosomal protein l20 | CK234_03738 | Not Available | Negative | 4510763 - 4511113 | 13181.3 |
| 50s ribosomal protein l35 | CK234_03739 | Not Available | Negative | 4511225 - 4511422 | 7367.31 |
| translation initiation factor if-3 | CK234_03740 | Not Available | Negative | 4511494 - 4512090 | 22643.4 |
| threonine--trna ligase | CK234_03741 | Not Available | Negative | 4512206 - 4514146 | 74203.1 |
| putative pep-cterm system tpr-repeat lipoprotein | CK234_03742 | Not Available | Negative | 4514227 - 4516236 | 77320.4 |
| peptide deformylase | CK234_03743 | Not Available | Negative | 4516309 - 4516863 | 21050.7 |
| putative holliday junction resolvase | CK234_03744 | Not Available | Negative | 4516887 - 4517306 | 15859.5 |
| hypothetical protein | CK234_03745 | Not Available | Positive | 4517512 - 4518750 | 47701.3 |
| protein of unknown function (duf3869) | CK234_03746 | Not Available | Positive | 4518761 - 4519651 | 31093.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

