Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_03717 | Not Available | Negative | 4492982 - 4493320 | 12594.3 |
| hypothetical protein | CK234_03718 | Not Available | Positive | 4493519 - 4493683 | 6520.03 |
| protein of unknown function (duf3784) | CK234_03719 | Not Available | Negative | 4493625 - 4493942 | 11703.0 |
| fic/doc family protein | CK234_03720 | Not Available | Negative | 4493954 - 4494340 | 15207.5 |
| putative tyrosine recombinase, xerc-like | CK234_03721 | Not Available | Positive | 4494393 - 4494995 | 22624.3 |
| hypothetical protein | CK234_03722 | Not Available | Positive | 4495193 - 4495639 | 16908.7 |
| hypothetical protein | CK234_03723 | Not Available | Negative | 4495755 - 4496000 | 9080.04 |
| recombinase | CK234_03724 | Not Available | Positive | 4496109 - 4497875 | 68237.5 |
| hypothetical protein | CK234_03725 | Not Available | Negative | 4497919 - 4498287 | 14119.2 |
| hypothetical protein | CK234_03726 | Not Available | Negative | 4498313 - 4499308 | 36051.6 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

