Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_03697 | Not Available | Negative | 4474261 - 4474527 | 10157.1 |
| hu-like dna-binding protein | CK234_03698 | Not Available | Negative | 4474524 - 4474802 | 10589.0 |
| hypothetical protein | CK234_03699 | Not Available | Negative | 4474814 - 4475167 | 13934.3 |
| c-terminal repeat of topoisomerase | CK234_03700 | Not Available | Negative | 4475164 - 4476000 | 31691.2 |
| hypothetical protein | CK234_03701 | Not Available | Negative | 4476001 - 4476708 | 26606.8 |
| hypothetical protein | CK234_03702 | Not Available | Negative | 4476689 - 4477192 | 20038.8 |
| toprim-like protein | CK234_03703 | Not Available | Negative | 4477189 - 4478298 | 42741.0 |
| protein of unknown function (duf3945) | CK234_03704 | Not Available | Negative | 4478303 - 4479862 | 58899.6 |
| protein of unknown function (duf4099) | CK234_03705 | Not Available | Negative | 4479864 - 4480583 | 27639.3 |
| putative murein dd-endopeptidase, mepm-like | CK234_03706 | Not Available | Positive | 4480624 - 4481289 | 25188.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

