Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylan 1,4-beta-xylosidase precursor | CK234_03687 | Not Available | Positive | 4462380 - 4464974 | 96043.1 |
| putative abc transporter atp-binding protein, yhes-like | CK234_03688 | Not Available | Negative | 4465064 - 4466656 | 59512.0 |
| mobc-like bacterial mobilization protein | CK234_03689 | Not Available | Positive | 4467387 - 4467650 | 10479.9 |
| relaxase/mobilization nuclease domain protein | CK234_03690 | Not Available | Positive | 4468028 - 4469647 | 62446.5 |
| putative plasmid partitioning protein, repa-like | CK234_03691 | Not Available | Positive | 4469663 - 4470286 | 23398.3 |
| hypothetical protein | CK234_03692 | Not Available | Positive | 4470345 - 4470779 | 16497.8 |
| putative zinc finger/helix-turn-helix protein, ygit family-like | CK234_03693 | Not Available | Negative | 4471070 - 4471456 | 14707.7 |
| conjugative coupling factor trad, sxt/tol subfamily | CK234_03694 | Not Available | Negative | 4471449 - 4473404 | 74508.9 |
| hypothetical protein | CK234_03695 | Not Available | Negative | 4473408 - 4473632 | 8469.28 |
| hypothetical protein | CK234_03696 | Not Available | Negative | 4473807 - 4474250 | 16588.5 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

