Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase b | CK234_03677 | Not Available | Negative | 4454244 - 4454951 | 26653.3 |
| undecaprenyl-diphosphatase | CK234_03678 | Not Available | Negative | 4454956 - 4455756 | 28480.0 |
| protein of unknown function (duf3098) | CK234_03679 | Not Available | Negative | 4455794 - 4456039 | 9145.44 |
| putative cell division protein, ftsx-like | CK234_03680 | Not Available | Negative | 4456052 - 4456921 | 32622.6 |
| ubiquinone biosynthesis o-methyltransferase | CK234_03681 | Not Available | Negative | 4456924 - 4457790 | 33272.9 |
| phage shock protein c | CK234_03682 | Not Available | Positive | 4457958 - 4458194 | 9155.18 |
| peptidyl-prolyl cis-trans isomerase, mip precursor-like | CK234_03683 | Not Available | Negative | 4458204 - 4458605 | 15118.3 |
| putative (dimethylallyl)adenosine trna methylthiotransferase, miab-like | CK234_03684 | Not Available | Negative | 4458605 - 4459975 | 51936.9 |
| hypothetical protein | CK234_03685 | Not Available | Positive | 4460313 - 4460663 | 13516.5 |
| propionyl-coa:succinate coa transferase | CK234_03686 | Not Available | Positive | 4460701 - 4462194 | 54010.7 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

