Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prtrc system protein c | CK234_03667 | Not Available | Positive | 4446708 - 4446929 | 8060.63 |
| hypothetical protein | CK234_03668 | Not Available | Positive | 4446965 - 4448047 | 42034.7 |
| prtrc system protein b | CK234_03669 | Not Available | Positive | 4448054 - 4448773 | 27467.6 |
| prtrc system thif family protein | CK234_03670 | Not Available | Positive | 4448770 - 4449558 | 29057.2 |
| hypothetical protein | CK234_03671 | Not Available | Negative | 4449523 - 4449801 | 11203.7 |
| hypothetical protein | CK234_03672 | Not Available | Negative | 4449894 - 4450112 | 8477.87 |
| protein of unknown function (duf3575) | CK234_03673 | Not Available | Positive | 4450164 - 4451378 | 45440.8 |
| hypothetical protein | CK234_03674 | Not Available | Positive | 4451433 - 4452284 | 30006.1 |
| bifunctional folate synthesis protein | CK234_03675 | Not Available | Negative | 4452712 - 4453158 | 16503.0 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | CK234_03676 | Not Available | Negative | 4453177 - 4454232 | 40193.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

