Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf4120) | CK234_03657 | Not Available | Positive | 4437978 - 4438268 | 10908.8 |
| aaa domain protein | CK234_03658 | Not Available | Negative | 4438380 - 4439636 | 48144.8 |
| hypothetical protein | CK234_03659 | Not Available | Negative | 4439797 - 4440333 | 20251.2 |
| protein of unknown function (duf3945) | CK234_03660 | Not Available | Positive | 4440406 - 4442172 | 67600.6 |
| protein of unknown function (duf4099) | CK234_03661 | Not Available | Positive | 4442215 - 4442478 | 9537.56 |
| dna topoisomerase 3 | CK234_03662 | Not Available | Positive | 4442575 - 4444671 | 77363.0 |
| hypothetical protein | CK234_03663 | Not Available | Positive | 4444872 - 4445108 | 8937.55 |
| hypothetical protein | CK234_03664 | Not Available | Positive | 4445121 - 4445477 | 13404.8 |
| hypothetical protein | CK234_03665 | Not Available | Positive | 4445474 - 4445689 | 8105.08 |
| filamentous hemagglutinin | CK234_03666 | Not Available | Positive | 4445726 - 4446703 | 36193.9 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

