Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wg containing repeat protein | CK234_03637 | Not Available | Negative | 4411715 - 4413409 | 63041.1 |
| putative transcriptional regulatory protein, yeht-like | CK234_03638 | Not Available | Negative | 4413675 - 4414439 | 29786.5 |
| putative sensor histidine kinase, yehu-like | CK234_03639 | Not Available | Negative | 4414567 - 4416618 | 79999.5 |
| aldose 1-epimerase | CK234_03640 | Not Available | Positive | 4416785 - 4417660 | 33987.7 |
| phosphonate utilization associated putative membrane protein | CK234_03641 | Not Available | Negative | 4417709 - 4418629 | 34791.9 |
| phosphoglucomutase | CK234_03642 | Not Available | Negative | 4418812 - 4420557 | 64726.5 |
| hypothetical protein | CK234_03643 | Not Available | Negative | 4420871 - 4421248 | 14163.1 |
| hypothetical protein | CK234_03644 | Not Available | Negative | 4421365 - 4421814 | 17146.1 |
| retaining alpha-galactosidase precursor | CK234_03645 | Not Available | Negative | 4421989 - 4423872 | 71910.4 |
| l-fucose mutarotase | CK234_03646 | Not Available | Negative | 4423944 - 4424327 | 15509.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

