Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf2975) | CK234_03607 | Not Available | Negative | 4377774 - 4378421 | 24199.5 |
| protein of unknown function (duf2975) | CK234_03608 | Not Available | Negative | 4378438 - 4379085 | 23980.7 |
| exosortase e/protease, vpeid-cterm system | CK234_03609 | Not Available | Negative | 4379094 - 4379924 | 30285.8 |
| hypothetical protein | CK234_03610 | Not Available | Negative | 4380097 - 4380396 | 11054.1 |
| duf3836 family of unknown function protein | CK234_03611 | Not Available | Negative | 4380396 - 4380815 | 16015.9 |
| putative riboflavin biosynthesis protein, ribf-like | CK234_03612 | Not Available | Negative | 4381194 - 4382114 | 35285.5 |
| putative alpha-d-glucose-1-phosphate phosphatase, yihx-like | CK234_03613 | Not Available | Negative | 4382114 - 4382728 | 24088.8 |
| calcium-transporting atpase 1 | CK234_03614 | Not Available | Negative | 4382756 - 4385386 | 97112.8 |
| Trna-met | Not Available | Not Available | Positive | 4385542 - 4385618 | Not Available |
| putative dna helicase | CK234_03616 | Not Available | Negative | 4385894 - 4390825 | 191711.0 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

