Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf3874) | CK234_03597 | Not Available | Negative | 4365448 - 4366698 | 48035.2 |
| putative tyrosine recombinase, xerd-like | CK234_03598 | Not Available | Negative | 4367613 - 4368731 | 43299.0 |
| putative holliday junction atp-dependent dna helicase, ruvb-like | CK234_03599 | Not Available | Positive | 4368831 - 4369886 | 39116.1 |
| polysaccharide biosynthesis protein | CK234_03600 | Not Available | Positive | 4369890 - 4371335 | 54344.9 |
| putative hydrophobic domain protein | CK234_03601 | Not Available | Positive | 4371338 - 4372702 | 50535.2 |
| peptidase s46 | CK234_03602 | Not Available | Positive | 4372707 - 4374833 | 80074.8 |
| hypothetical protein | CK234_03603 | Not Available | Positive | 4375004 - 4375279 | 10549.0 |
| putative dead-box atp-dependent rna helicase, csha-like | CK234_03604 | Not Available | Negative | 4375154 - 4376971 | 68571.4 |
| cro/c1-type hth dna-binding domain protein | CK234_03605 | Not Available | Negative | 4377290 - 4377475 | 6794.33 |
| hypothetical protein | CK234_03606 | Not Available | Negative | 4377506 - 4377763 | 10168.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

