Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine dipeptidase | CK234_03587 | Not Available | Positive | 4353736 - 4354401 | 25274.8 |
| hypothetical protein | CK234_03588 | Not Available | Positive | 4354405 - 4355589 | 43829.1 |
| putative response regulator, mpra-like | CK234_03589 | Not Available | Negative | 4355586 - 4356269 | 26125.7 |
| senx3-like signal-transduction histidine kinase | CK234_03590 | Not Available | Negative | 4356274 - 4357812 | 59506.4 |
| outer membrane protein beta-barrel family protein | CK234_03591 | Not Available | Positive | 4357864 - 4359936 | 79077.3 |
| putative cysteine desulfuration protein, sufe-like | CK234_03592 | Not Available | Negative | 4359972 - 4360400 | 16169.5 |
| putative aminopeptidase, ywad precursor-like | CK234_03593 | Not Available | Negative | 4360412 - 4361416 | 37858.6 |
| putative gamma-glutamyl-gamma-aminobutyrate hydrolase, puud-like | CK234_03594 | Not Available | Negative | 4361485 - 4363242 | 64844.1 |
| phosphate acetyltransferase | CK234_03595 | Not Available | Positive | 4363325 - 4364233 | 33315.3 |
| butyrate kinase 2 | CK234_03596 | Not Available | Positive | 4364246 - 4365310 | 38268.3 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

