Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf4133) | CK234_00325 | Not Available | Positive | 406747 - 407073 | 12281.4 |
| virb4-like type iv secretion system protein | CK234_00326 | Not Available | Positive | 407070 - 409604 | 97656.3 |
| protein of unknown function (duf3876) | CK234_00327 | Not Available | Positive | 409601 - 409957 | 13221.9 |
| protein of unknown function (duf4141) | CK234_00328 | Not Available | Positive | 409954 - 410583 | 23862.6 |
| conjugative transposon traj protein | CK234_00329 | Not Available | Positive | 410586 - 411599 | 37369.7 |
| conjugative transposon trak protein | CK234_00330 | Not Available | Positive | 411723 - 412346 | 23968.5 |
| protein of unknown function (duf3989) | CK234_00331 | Not Available | Positive | 412343 - 412642 | 10933.5 |
| conjugative transposon tram protein | CK234_00332 | Not Available | Positive | 412593 - 413900 | 48149.3 |
| conjugative transposon tran protein (tigr03780) | CK234_00333 | Not Available | Positive | 413950 - 414864 | 34753.2 |
| conjugative transposon trao protein | CK234_00334 | Not Available | Positive | 414861 - 415448 | 21836.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

