Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-formylbenzenesulfonate dehydrogenase tsac1/tsac2 | CK234_03567 | Not Available | Negative | 4337893 - 4338654 | 26914.6 |
| nad(p)h-binding protein | CK234_03568 | Not Available | Negative | 4338661 - 4339287 | 23072.4 |
| general stress protein 69 | CK234_03569 | Not Available | Negative | 4339295 - 4340308 | 37901.3 |
| flavodoxin | CK234_03570 | Not Available | Negative | 4340305 - 4340874 | 20856.9 |
| 4-carboxymuconolactone decarboxylase | CK234_03571 | Not Available | Negative | 4340883 - 4341647 | 28305.2 |
| flavoredoxin | CK234_03572 | Not Available | Negative | 4341695 - 4342699 | 37175.7 |
| nadh-dependent butanol dehydrogenase a | CK234_03573 | Not Available | Negative | 4342713 - 4343879 | 42814.3 |
| galactoside o-acetyltransferase | CK234_03574 | Not Available | Negative | 4343901 - 4344470 | 20690.8 |
| flavodoxin | CK234_03575 | Not Available | Negative | 4344473 - 4345522 | 38054.5 |
| general stress protein 69 | CK234_03576 | Not Available | Negative | 4345535 - 4346659 | 41942.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

