Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_03557 | Not Available | Negative | 4326889 - 4327155 | 9070.4 |
| polysaccharide biosynthesis protein | CK234_03558 | Not Available | Negative | 4327161 - 4328564 | 53287.1 |
| putative tyrosine-protein kinase | CK234_03559 | Not Available | Negative | 4328624 - 4329814 | 44002.7 |
| putative tyrosine recombinase, xerd-like | CK234_03560 | Not Available | Positive | 4330119 - 4331195 | 41694.0 |
| putative transcriptional regulatory protein, zrar-like | CK234_03561 | Not Available | Negative | 4331427 - 4332713 | 48432.2 |
| putative aerobic respiration control sensor protein, arcb-like | CK234_03562 | Not Available | Negative | 4332710 - 4335118 | 91527.5 |
| tatcy-like sec-independent protein translocase | CK234_03563 | Not Available | Negative | 4335126 - 4335908 | 28829.0 |
| putative sec-independent protein translocase protein, tata-like | CK234_03564 | Not Available | Negative | 4335913 - 4336107 | 7139.18 |
| putative nad(p)h-dependent fmn-containing oxidoreductase, ywqn-like | CK234_03565 | Not Available | Negative | 4336182 - 4336721 | 19892.7 |
| glyoxal reductase | CK234_03566 | Not Available | Negative | 4336972 - 4337877 | 34138.9 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

