Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf1972) | CK234_03547 | Not Available | Negative | 4315189 - 4316319 | 43854.1 |
| putative glycosyltransferase, wbsx-like | CK234_03548 | Not Available | Negative | 4316323 - 4317372 | 41128.2 |
| glycosyl transferase family 2 | CK234_03549 | Not Available | Negative | 4317369 - 4318277 | 35718.3 |
| polysaccharide pyruvyl transferase | CK234_03550 | Not Available | Negative | 4318291 - 4319454 | 45765.2 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | CK234_03551 | Not Available | Negative | 4319522 - 4321288 | 65741.0 |
| putative glycosyltransferase, wbsx-like | CK234_03552 | Not Available | Negative | 4321419 - 4322531 | 43452.0 |
| putative glycosyltransferase, wbsx-like | CK234_03553 | Not Available | Negative | 4322533 - 4323612 | 43172.6 |
| hypothetical protein | CK234_03554 | Not Available | Negative | 4323644 - 4324897 | 48031.4 |
| putative polysaccharide pyruvyl transferase, csab-like | CK234_03555 | Not Available | Negative | 4324965 - 4326128 | 44570.3 |
| nitroreductase family protein | CK234_03556 | Not Available | Negative | 4326131 - 4326856 | 27699.0 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

