Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n,n'-diacetyllegionaminic acid synthase | CK234_03517 | Not Available | Positive | 4283770 - 4284642 | 33260.7 |
| hypothetical protein | CK234_03518 | Not Available | Positive | 4284660 - 4284908 | 9391.23 |
| putative 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase, kdsc-like | CK234_03519 | Not Available | Positive | 4284912 - 4286066 | 43241.0 |
| hypothetical protein | CK234_03520 | Not Available | Positive | 4286066 - 4287193 | 43666.9 |
| putative glycosyltransferase, epsj-like | CK234_03521 | Not Available | Positive | 4287306 - 4287671 | 13505.1 |
| hypothetical protein | CK234_03522 | Not Available | Positive | 4287679 - 4288296 | 23697.7 |
| acyltransferase family protein | CK234_03523 | Not Available | Positive | 4288423 - 4288920 | 18936.7 |
| putative nadp-dependent 3-hydroxy acid dehydrogenase, ydfg-like | CK234_03524 | Not Available | Negative | 4289072 - 4289830 | 27233.0 |
| endo-1,4-beta-xylanase z precursor | CK234_03525 | Not Available | Negative | 4289835 - 4290653 | 30789.0 |
| zinc-transporting atpase | CK234_03526 | Not Available | Positive | 4290751 - 4292469 | 62418.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

