Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate-like multi antimicrobial extrusion protein | CK234_03507 | Not Available | Positive | 4272915 - 4274378 | 54383.4 |
| nad dependent epimerase/dehydratase family protein | CK234_03508 | Not Available | Positive | 4274419 - 4275528 | 43051.9 |
| coenzyme f420 hydrogenase, subunit gamma | CK234_03509 | Not Available | Positive | 4275535 - 4276776 | 46724.4 |
| maltose o-acetyltransferase | CK234_03510 | Not Available | Positive | 4276782 - 4277351 | 21521.7 |
| acyltransferase family protein | CK234_03511 | Not Available | Positive | 4277348 - 4278358 | 39277.0 |
| hypothetical protein | CK234_03512 | Not Available | Positive | 4278362 - 4279600 | 48845.7 |
| putative polysaccharide pyruvyl transferase, csab-like | CK234_03513 | Not Available | Positive | 4279604 - 4280818 | 46610.5 |
| sugar transferase, pep-cterm/epsh1 system associated | CK234_03514 | Not Available | Positive | 4280935 - 4281999 | 41635.5 |
| glycosyl transferases group 1 | CK234_03515 | Not Available | Positive | 4282003 - 4283109 | 42453.5 |
| serine acetyltransferase | CK234_03516 | Not Available | Positive | 4283448 - 4283744 | 10257.5 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

