Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_03497 | Not Available | Positive | 4263592 - 4263990 | 15166.4 |
| hypothetical protein | CK234_03498 | Not Available | Positive | 4263994 - 4264611 | 23438.6 |
| hypothetical protein | CK234_03499 | Not Available | Positive | 4264593 - 4265027 | 16289.8 |
| protein of unknown function (duf4134) | CK234_03500 | Not Available | Positive | 4265094 - 4265450 | 12585.6 |
| hypothetical protein | CK234_03501 | Not Available | Positive | 4265463 - 4265753 | 10629.6 |
| putative conjugation system atpase, trag family-like | CK234_03502 | Not Available | Positive | 4265769 - 4268123 | 91418.7 |
| putative atp-dependent dna helicase, recq-like | CK234_03503 | Not Available | Positive | 4268326 - 4270593 | 85857.2 |
| hypothetical protein | CK234_03504 | Not Available | Positive | 4270967 - 4271164 | 7426.12 |
| udp-glucose 6-dehydrogenase | CK234_03505 | Not Available | Positive | 4271253 - 4271771 | 19765.6 |
| acyltransferase family protein | CK234_03506 | Not Available | Positive | 4271820 - 4272797 | 38220.0 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

