Phocaeicola vulgatus str. CL10T00C06

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus str. CL10T00C06 is a Gram-positive, rod-shaped bacterium that exists as single cells and is classified as an anaerobe, indicating its metabolic processes occur in the absence of oxygen. This strain is notably host-associated, suggesting a potential symbiotic relationship with its host organism. As an anaerobic bacterium, P. vulgatus str. CL10T00C06 may play a crucial role in various biochemical processes within its host, potentially contributing to gut health, nutrient absorption, or fermentation of dietary fibers. The specific habitat of this strain underscores its ecological significance, as host-associated microbes often participate in complex interactions within the microbiome, influencing both host physiology and microbial community dynamics. Understanding the traits of P. vulgatus str. CL10T00C06 enhances our knowledge of the functional diversity found in anaerobic bacteria and their contributions to the overall health of the microbiological ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainCL10T00C06

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus str. CL10T00C06
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus strain CL10T00C06 BVCL10_contig0222, whole

Gene Summary

Adenine Count

1420826 bp

Thymine Count

1424215 bp

Guanine Count

1046299 bp

Cytosine Count

1024853 bp

Genome Length

4918368 bp

Protein-coding Genes

4025 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosomal large subunit pseudouridine synthase dCK234_03487Not AvailableNegative4247960 - 424888635718.2
rlmcd-like 23s rrna uracil-c(5)-methyltransferaseCK234_03488Not AvailableNegative4248931 - 425035254000.1
pyruvate, phosphate dikinaseCK234_03489Not AvailablePositive4250506 - 4253271101684.0
phage integrase sam-like domain proteinCK234_03490Not AvailablePositive4253485 - 425498158037.7
hypothetical proteinCK234_03491Not AvailableNegative4255055 - 42552678204.06
hypothetical proteinCK234_03492Not AvailablePositive4256143 - 425652914710.8
relaxase/mobilization nuclease domain proteinCK234_03493Not AvailablePositive4256647 - 425821260685.2
dna helicase iiCK234_03494Not AvailableNegative4258622 - 426039768455.1
recf proteinCK234_03495Not AvailableNegative4260400 - 426247579420.4
putative plasmid partitioning protein, repa-likeCK234_03496Not AvailablePositive4262704 - 426356432355.2

Displaying genes 3491 – 3500 of 4110 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.