Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginase family protein | CK234_03477 | Not Available | Positive | 4234646 - 4235440 | 30111.8 |
| methylglyoxal synthase | CK234_03478 | Not Available | Positive | 4235495 - 4236031 | 20470.6 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | CK234_03479 | Not Available | Negative | 4236499 - 4237407 | 33916.5 |
| polyphosphate kinase | CK234_03480 | Not Available | Negative | 4237400 - 4237771 | 14054.7 |
| hypothetical protein | CK234_03481 | Not Available | Negative | 4238024 - 4239115 | 41756.9 |
| ferrienterobactin receptor precursor | CK234_03482 | Not Available | Positive | 4239692 - 4242799 | 114493.0 |
| starch-binding associating with outer membrane | CK234_03483 | Not Available | Positive | 4242829 - 4244136 | 49282.1 |
| phosphodiester glycosidase | CK234_03484 | Not Available | Positive | 4244302 - 4245228 | 33916.9 |
| phosphodiester glycosidase | CK234_03485 | Not Available | Positive | 4245221 - 4246084 | 31291.2 |
| hypothetical protein | CK234_03486 | Not Available | Negative | 4246659 - 4247009 | 13822.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

