Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna metabolism protein | CK234_03457 | Not Available | Negative | 4209233 - 4210000 | 30642.0 |
| putative dna modification/repair radical sam protein | CK234_03458 | Not Available | Negative | 4209997 - 4211265 | 48564.8 |
| putative thiol-disulfide oxidoreductase, resa-like | CK234_03459 | Not Available | Positive | 4211622 - 4212962 | 51223.8 |
| tonb-linked outer membrane protein, susc/raga family | CK234_03460 | Not Available | Positive | 4213419 - 4216319 | 109458.0 |
| starch-binding associating with outer membrane | CK234_03461 | Not Available | Positive | 4216332 - 4217774 | 54928.9 |
| putative fkbp-type peptidyl-prolyl cis-trans isomerase, slyd-like | CK234_03462 | Not Available | Negative | 4217922 - 4218500 | 21017.5 |
| hypothetical protein | CK234_03463 | Not Available | Positive | 4218856 - 4219230 | 14035.0 |
| dihydroxy-acid dehydratase | CK234_03464 | Not Available | Positive | 4219641 - 4221443 | 64117.2 |
| hypothetical protein | CK234_03465 | Not Available | Negative | 4222527 - 4223012 | 18789.7 |
| ferritin | CK234_03466 | Not Available | Positive | 4224136 - 4224345 | 8138.74 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

