Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | CK234_03427 | Not Available | Positive | 4174293 - 4175336 | 38168.5 |
| tonb family c-terminal domain protein | CK234_03428 | Not Available | Positive | 4175464 - 4176549 | 41925.6 |
| sura n-terminal domain protein | CK234_03429 | Not Available | Negative | 4177180 - 4179312 | 78893.4 |
| hemolysin c | CK234_03430 | Not Available | Negative | 4179418 - 4180677 | 47647.0 |
| putative lptc-related lipopolysaccharide-assembly protein | CK234_03431 | Not Available | Negative | 4180691 - 4181335 | 24876.2 |
| tetratricopeptide repeat protein | CK234_03432 | Not Available | Negative | 4181338 - 4182693 | 50268.8 |
| hypothetical protein | CK234_03433 | Not Available | Negative | 4182740 - 4184056 | 49216.0 |
| type iii pantothenate kinase | CK234_03434 | Not Available | Negative | 4184043 - 4184771 | 26911.9 |
| protein of unknown function (duf4105) | CK234_03435 | Not Available | Positive | 4184898 - 4186073 | 45049.3 |
| putative alkaline phosphatase, pafa precursor-like | CK234_03436 | Not Available | Positive | 4186070 - 4187653 | 59448.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

