Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-bladed beta-propeller | CK234_03417 | Not Available | Negative | 4165579 - 4166790 | 45146.7 |
| nveala protein | CK234_03418 | Not Available | Negative | 4166856 - 4167158 | 10707.0 |
| hypothetical protein | CK234_03419 | Not Available | Negative | 4167155 - 4167364 | 8407.45 |
| hypothetical protein | CK234_03420 | Not Available | Positive | 4167698 - 4167949 | 9666.39 |
| transposase dde domain protein | CK234_03421 | Not Available | Negative | 4168417 - 4168980 | 22118.2 |
| putative prokaryotic signal transducing protein | CK234_03422 | Not Available | Negative | 4169148 - 4169723 | 21611.0 |
| transposase dde domain protein | CK234_03423 | Not Available | Negative | 4170128 - 4170571 | 16775.4 |
| dna repair protein radc | CK234_03424 | Not Available | Negative | 4171589 - 4172197 | 22783.5 |
| putative acetolactate synthase small subunit | CK234_03425 | Not Available | Positive | 4172961 - 4173515 | 21284.6 |
| acyl-acp thioesterase | CK234_03426 | Not Available | Positive | 4173515 - 4174258 | 28500.1 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

