Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna primase, trac-like | CK234_03407 | Not Available | Positive | 4156744 - 4157937 | 45520.3 |
| single stranded dna-binding protein (ssb) | CK234_03408 | Not Available | Positive | 4157957 - 4158298 | 12580.8 |
| putative type iv conjugative transfer system coupling protein, trad-like | CK234_03409 | Not Available | Positive | 4158310 - 4160256 | 72941.5 |
| hypothetical protein | CK234_03410 | Not Available | Positive | 4160279 - 4160698 | 15244.2 |
| toprim-like protein | CK234_03411 | Not Available | Positive | 4160822 - 4161847 | 39636.0 |
| hypothetical protein | CK234_03412 | Not Available | Positive | 4161900 - 4162385 | 18162.9 |
| hypothetical protein | CK234_03413 | Not Available | Negative | 4162639 - 4162995 | 13426.2 |
| hypothetical protein | CK234_03414 | Not Available | Negative | 4163037 - 4163231 | 7422.97 |
| 6-bladed beta-propeller | CK234_03415 | Not Available | Negative | 4163530 - 4164693 | 44408.9 |
| hypothetical protein | CK234_03416 | Not Available | Negative | 4164948 - 4165568 | 24195.9 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

