Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative conjugation system atpase, trag family-like | CK234_03397 | Not Available | Positive | 4147302 - 4149908 | 99926.5 |
| hypothetical protein | CK234_03398 | Not Available | Positive | 4149901 - 4150122 | 7971.83 |
| hypothetical protein | CK234_03399 | Not Available | Positive | 4150128 - 4150724 | 22714.5 |
| conjugative transposon traj protein | CK234_03400 | Not Available | Positive | 4150730 - 4151785 | 37952.4 |
| conjugative transposon trak protein | CK234_03401 | Not Available | Positive | 4151791 - 4152489 | 26264.1 |
| conjugative transposon tram protein | CK234_03402 | Not Available | Positive | 4152476 - 4153759 | 49009.9 |
| hypothetical protein | CK234_03403 | Not Available | Positive | 4153756 - 4153932 | 6826.63 |
| conjugative transposon tran protein (tigr03780) | CK234_03404 | Not Available | Positive | 4153953 - 4155065 | 42975.1 |
| protein of unknown function (duf3945) | CK234_03405 | Not Available | Positive | 4155062 - 4156534 | 55759.5 |
| hypothetical protein | CK234_03406 | Not Available | Positive | 4156555 - 4156740 | 7306.43 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

