Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 88 | CK234_00305 | Not Available | Positive | 385547 - 386740 | 45823.0 |
| udp-n-acetyl-d-mannosaminuronic acid transferase | CK234_00306 | Not Available | Positive | 386753 - 387451 | 27114.1 |
| udp-n-acetylglucosamine 2-epimerase | CK234_00307 | Not Available | Positive | 387463 - 388623 | 43449.7 |
| hypothetical protein | CK234_00308 | Not Available | Positive | 388632 - 388814 | 7161.94 |
| hypothetical protein | CK234_00309 | Not Available | Positive | 388912 - 389082 | 6301.56 |
| arm dna-binding domain protein | CK234_00310 | Not Available | Positive | 389519 - 389827 | 11928.7 |
| dna phosphorothioation system restriction enzyme | CK234_00311 | Not Available | Positive | 389852 - 392113 | 87566.0 |
| putative autoinducer 2 sensor kinase/phosphatase, luxq-like | CK234_00312 | Not Available | Positive | 392443 - 394818 | 90287.3 |
| putative transcriptional regulatory protein, zrar-like | CK234_00313 | Not Available | Positive | 394763 - 396067 | 48737.6 |
| hypothetical protein | CK234_00314 | Not Available | Negative | 396073 - 396468 | 15144.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

