Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_03378 | Not Available | Positive | 4138478 - 4139041 | 21346.2 |
| putative type iv ta system abieii-like nucleotidyl transferase toxin | CK234_03379 | Not Available | Positive | 4139038 - 4139913 | 33941.6 |
| calcineurin-like phosphoesterase | CK234_03380 | Not Available | Positive | 4139906 - 4140718 | 31598.4 |
| hypothetical protein | CK234_03381 | Not Available | Positive | 4140965 - 4141234 | 10199.4 |
| hypothetical protein | CK234_03382 | Not Available | Positive | 4141221 - 4141433 | 7845.32 |
| protein of unknown function (duf1273) | CK234_03383 | Not Available | Negative | 4141651 - 4142046 | 14634.7 |
| comf family protein | CK234_03384 | Not Available | Negative | 4142144 - 4142725 | 22158.8 |
| hypothetical protein | CK234_03385 | Not Available | Negative | 4142794 - 4143171 | 14196.9 |
| hypothetical protein | CK234_03386 | Not Available | Positive | 4145071 - 4145484 | 16091.5 |
| Trna-thr | Not Available | Not Available | Positive | 4145591 - 4145665 | Not Available |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

