Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_03368 | Not Available | Negative | 4131719 - 4131973 | 9720.77 |
| hypothetical protein | CK234_03369 | Not Available | Negative | 4131986 - 4133206 | 46199.8 |
| hypothetical protein | CK234_03370 | Not Available | Positive | 4133425 - 4134078 | 24993.5 |
| protein of unknown function (duf1653) | CK234_03371 | Not Available | Positive | 4134082 - 4134882 | 30739.1 |
| glucosyl-3-phosphoglycerate phosphatase | CK234_03372 | Not Available | Positive | 4134923 - 4135456 | 20240.3 |
| protein of unknown function (duf1294) | CK234_03373 | Not Available | Positive | 4135474 - 4135752 | 10659.8 |
| flavoredoxin | CK234_03374 | Not Available | Positive | 4135773 - 4136336 | 20856.2 |
| hypothetical protein | CK234_03375 | Not Available | Positive | 4136348 - 4137016 | 25951.9 |
| pyridoxamine 5'-phosphate oxidase | CK234_03376 | Not Available | Positive | 4137019 - 4137534 | 19131.9 |
| dna alkylation repair enzyme | CK234_03377 | Not Available | Positive | 4137580 - 4138260 | 26762.5 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

