Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate-flavodoxin oxidoreductase | CK234_03358 | Not Available | Positive | 4115545 - 4119090 | 129303.0 |
| arylsulfatase | CK234_03359 | Not Available | Positive | 4119306 - 4120823 | 57821.3 |
| y4mf family transcriptional regulator | CK234_03360 | Not Available | Positive | 4121755 - 4122057 | 11364.0 |
| orf6n domain protein | CK234_03361 | Not Available | Positive | 4122067 - 4123005 | 36418.8 |
| helix-turn-helix domain of resolvase | CK234_03362 | Not Available | Negative | 4123047 - 4124342 | 49799.8 |
| fimbrillin-like protein | CK234_03363 | Not Available | Negative | 4124455 - 4126536 | 75747.7 |
| fimbrillin-like protein | CK234_03364 | Not Available | Negative | 4126697 - 4127737 | 37815.9 |
| protein of unknown function (duf5119) | CK234_03365 | Not Available | Negative | 4127791 - 4128837 | 39390.9 |
| protein of unknown function (duf3575) | CK234_03366 | Not Available | Negative | 4128834 - 4130108 | 47945.3 |
| putative tyrosine recombinase, xerc-like | CK234_03367 | Not Available | Negative | 4130355 - 4131557 | 45562.9 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

