Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_03348 | Not Available | Positive | 4101669 - 4101944 | 10856.2 |
| ribosomal large subunit pseudouridine synthase a | CK234_03349 | Not Available | Positive | 4102030 - 4103652 | 62147.7 |
| putative multidrug export protein, mepa-like | CK234_03350 | Not Available | Negative | 4103718 - 4105109 | 50739.0 |
| trkg-like potassium uptake protein | CK234_03351 | Not Available | Negative | 4105205 - 4106101 | 33518.6 |
| trkh-like potassium uptake protein | CK234_03352 | Not Available | Negative | 4106124 - 4106717 | 21860.7 |
| putative efflux pump periplasmic linker, bepf-like | CK234_03353 | Not Available | Positive | 4107209 - 4108408 | 44405.6 |
| putative efflux pump membrane transporter, bepe-like | CK234_03354 | Not Available | Positive | 4108475 - 4111576 | 113123.0 |
| putative outer membrane protein, oprm precursor-like | CK234_03355 | Not Available | Positive | 4111598 - 4112971 | 51806.2 |
| hypothetical protein | CK234_03356 | Not Available | Negative | 4113010 - 4114221 | 45667.2 |
| aaa domain protein | CK234_03357 | Not Available | Positive | 4114324 - 4115502 | 46146.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

