Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminomethyltransferase | CK234_03328 | Not Available | Negative | 4084301 - 4085386 | 39655.6 |
| peptidase t-like protein | CK234_03329 | Not Available | Negative | 4085422 - 4086642 | 45345.2 |
| amidophosphoribosyltransferase precursor | CK234_03330 | Not Available | Negative | 4086750 - 4088156 | 51992.8 |
| phage integrase sam-like domain protein | CK234_03331 | Not Available | Positive | 4088460 - 4089554 | 42234.6 |
| putative tyrosine recombinase, xerd-like | CK234_03332 | Not Available | Negative | 4090541 - 4090813 | 10536.9 |
| helicase iv | CK234_03333 | Not Available | Positive | 4091189 - 4092133 | 35771.1 |
| transposase dde domain protein | CK234_03334 | Not Available | Positive | 4092225 - 4092965 | 28001.7 |
| hypothetical protein | CK234_03335 | Not Available | Negative | 4093271 - 4093528 | 10348.7 |
| hypothetical protein | CK234_03336 | Not Available | Negative | 4093551 - 4093781 | 8754.33 |
| putative trmh family trna/rrna methyltransferase | CK234_03337 | Not Available | Negative | 4093921 - 4094727 | 29085.6 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

