Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | CK234_03318 | Not Available | Negative | 4076003 - 4076599 | 22356.1 |
| ybbr-like protein | CK234_03319 | Not Available | Negative | 4076592 - 4077605 | 39038.4 |
| preprotein translocase, yajc subunit | CK234_03320 | Not Available | Negative | 4077619 - 4077933 | 11609.3 |
| putative nusb-like protein | CK234_03321 | Not Available | Negative | 4077990 - 4078916 | 36291.4 |
| protein of unknown function (duf3276) | CK234_03322 | Not Available | Positive | 4079112 - 4079495 | 14786.4 |
| 50s ribosomal protein l25 | CK234_03323 | Not Available | Positive | 4079675 - 4080271 | 21429.4 |
| peptidyl-trna hydrolase | CK234_03324 | Not Available | Positive | 4080296 - 4080859 | 20618.0 |
| heat shock protein 15 | CK234_03325 | Not Available | Positive | 4080859 - 4081287 | 16437.7 |
| hypothetical protein | CK234_03326 | Not Available | Negative | 4081378 - 4081803 | 16329.5 |
| putative inner membrane protein, ybal-like | CK234_03327 | Not Available | Negative | 4081828 - 4084095 | 84385.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

