Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin arginine-targeting protein translocase, tata/e family | CK234_03308 | Not Available | Negative | 4066020 - 4066223 | 7276.18 |
| hypothetical protein | CK234_03309 | Not Available | Negative | 4066371 - 4066880 | 18509.5 |
| hypothetical protein | CK234_03310 | Not Available | Positive | 4067014 - 4067496 | 17559.9 |
| protein of unknown function (duf4010) | CK234_03311 | Not Available | Positive | 4067574 - 4068863 | 48232.9 |
| conserved hypothetical integral membrane protein | CK234_03312 | Not Available | Negative | 4068956 - 4069942 | 35078.0 |
| putative hth-type transcriptional regulator, cysl-like | CK234_03313 | Not Available | Negative | 4070031 - 4070927 | 34399.8 |
| hypothetical protein | CK234_03314 | Not Available | Negative | 4070940 - 4071521 | 21450.8 |
| clpb-like chaperone protein | CK234_03315 | Not Available | Positive | 4071796 - 4074384 | 97149.7 |
| hypothetical protein | CK234_03316 | Not Available | Positive | 4075335 - 4075619 | 10577.0 |
| hypothetical protein | CK234_03317 | Not Available | Negative | 4075496 - 4075936 | 16021.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

