Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf4221) | CK234_03288 | Not Available | Negative | 4037781 - 4038935 | 45151.7 |
| hypothetical protein | CK234_03289 | Not Available | Negative | 4039051 - 4039317 | 9793.29 |
| creatinine amidohydrolase | CK234_03290 | Not Available | Negative | 4039526 - 4040281 | 28446.1 |
| 1,3-propanediol dehydrogenase | CK234_03291 | Not Available | Negative | 4040281 - 4041453 | 42892.9 |
| putative atpase (aaa+ superfamily) | CK234_03292 | Not Available | Positive | 4041843 - 4042580 | 28540.3 |
| protein of unknown function (duf418) | CK234_03293 | Not Available | Positive | 4042905 - 4044086 | 45342.9 |
| putative dna helicase | CK234_03294 | Not Available | Negative | 4044235 - 4047702 | 133294.0 |
| alpha-galactosidase | CK234_03295 | Not Available | Positive | 4047954 - 4050110 | 82558.3 |
| putative ecf rna polymerase sigma factor, sigw-like | CK234_03296 | Not Available | Positive | 4051007 - 4051597 | 23509.3 |
| protein of unknown function (duf4974) | CK234_03297 | Not Available | Positive | 4051658 - 4052656 | 38231.8 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

