Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein | CK234_00295 | Not Available | Positive | 375237 - 376580 | 50712.3 |
| hypothetical protein | CK234_00296 | Not Available | Positive | 376568 - 377770 | 46295.6 |
| sugar transferase, pep-cterm/epsh1 system associated | CK234_00297 | Not Available | Positive | 377777 - 378946 | 44933.9 |
| udp-glucose 4-epimerase | CK234_00298 | Not Available | Positive | 378952 - 380025 | 40101.4 |
| thioester reductase domain protein | CK234_00299 | Not Available | Positive | 380199 - 381353 | 43081.1 |
| putative cupin fold metalloprotein, wbuc family-like | CK234_00300 | Not Available | Positive | 381360 - 381758 | 14923.0 |
| udp-2,3-diacetamido-2,3-dideoxy-d-glucuronate 2-epimerase | CK234_00301 | Not Available | Positive | 381765 - 382946 | 44208.0 |
| glycosyltransferase family 4 | CK234_00302 | Not Available | Positive | 382978 - 384159 | 45401.1 |
| putative bifunctional protein, glmu-like | CK234_00303 | Not Available | Positive | 384574 - 385071 | 18250.5 |
| serine o-acetyltransferase | CK234_00304 | Not Available | Positive | 385114 - 385353 | 8768.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

