Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna mismatch repair protein, muts-like | CK234_03278 | Not Available | Negative | 4029061 - 4030860 | 68617.8 |
| hypothetical protein | CK234_03279 | Not Available | Positive | 4031190 - 4031861 | 23981.6 |
| protein of unknown function (duf4252) | CK234_03280 | Not Available | Negative | 4032116 - 4032574 | 17333.2 |
| hypothetical protein | CK234_03281 | Not Available | Negative | 4032571 - 4033101 | 20186.3 |
| putative ecf rna polymerase sigma factor, sigg-like | CK234_03282 | Not Available | Negative | 4033088 - 4033600 | 20100.9 |
| protein of unknown function (duf4252) | CK234_03283 | Not Available | Negative | 4033587 - 4034072 | 18355.6 |
| sepiapterin reductase | CK234_03284 | Not Available | Negative | 4034409 - 4035137 | 27098.2 |
| methionine gamma-lyase | CK234_03285 | Not Available | Negative | 4035148 - 4036425 | 47021.8 |
| acyl-coa thioester hydrolase, ybgc/ybaw family | CK234_03286 | Not Available | Positive | 4036548 - 4036991 | 16882.2 |
| protein of unknown function (duf1573) | CK234_03287 | Not Available | Negative | 4037056 - 4037784 | 27262.7 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

