Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acidobacterial duplicated orphan permease | CK234_03268 | Not Available | Negative | 4016804 - 4017262 | 17828.2 |
| acidobacterial duplicated orphan permease | CK234_03269 | Not Available | Negative | 4017309 - 4019183 | 69804.0 |
| putative macrolide export atp-binding/permease protein, macb-like | CK234_03270 | Not Available | Negative | 4019243 - 4019917 | 24767.0 |
| acidobacterial duplicated orphan permease | CK234_03271 | Not Available | Negative | 4019937 - 4022336 | 91452.7 |
| acidobacterial duplicated orphan permease | CK234_03272 | Not Available | Negative | 4022357 - 4024726 | 90041.8 |
| acidobacterial duplicated orphan permease | CK234_03273 | Not Available | Negative | 4024740 - 4026362 | 62711.5 |
| dna-directed rna polymerase subunit alpha | CK234_03274 | Not Available | Positive | 4026537 - 4026980 | 16936.3 |
| 50s ribosomal protein l17 | CK234_03275 | Not Available | Positive | 4026984 - 4027472 | 17965.6 |
| hypothetical protein | CK234_03276 | Not Available | Positive | 4027883 - 4028308 | 15788.1 |
| hypothetical protein | CK234_03277 | Not Available | Positive | 4028427 - 4028966 | 19772.7 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

