Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase | CK234_03258 | Not Available | Negative | 4004816 - 4006048 | 46069.1 |
| putative thiol-disulfide oxidoreductase, resa-like | CK234_03259 | Not Available | Positive | 4006321 - 4006815 | 18385.1 |
| putative alpha-d-glucose-1-phosphate phosphatase, yihx-like | CK234_03260 | Not Available | Positive | 4006974 - 4007594 | 23389.8 |
| putative permease yjgp/yjgq family protein | CK234_03261 | Not Available | Negative | 4007595 - 4008767 | 45489.9 |
| queuine trna-ribosyltransferase | CK234_03262 | Not Available | Negative | 4008778 - 4009908 | 42665.6 |
| lon protease 2 | CK234_03263 | Not Available | Negative | 4009911 - 4012388 | 92665.5 |
| trna1(val) (adenine(37)-n6)-methyltransferase | CK234_03264 | Not Available | Positive | 4012570 - 4013274 | 26267.5 |
| diacylglycerol kinase | CK234_03265 | Not Available | Negative | 4013355 - 4014389 | 38141.2 |
| 8-amino-7-oxononanoate synthase | CK234_03266 | Not Available | Positive | 4014634 - 4015821 | 44190.9 |
| carboxylate/amino acid/amine transporter | CK234_03267 | Not Available | Positive | 4015909 - 4016796 | 31789.8 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

