Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphoserine phosphatase 2 | CK234_03248 | Not Available | Negative | 3996057 - 3996587 | 20094.8 |
| cobalamin synthase | CK234_03249 | Not Available | Negative | 3996581 - 3997330 | 27738.7 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | CK234_03250 | Not Available | Negative | 3997333 - 3998370 | 37449.5 |
| putative bifunctional adenosylcobalamin biosynthesis protein, cobp-like | CK234_03251 | Not Available | Negative | 3998379 - 3998888 | 19446.2 |
| fha domain protein | CK234_03252 | Not Available | Negative | 3998893 - 3999417 | 19818.0 |
| sporulation related domain protein | CK234_03253 | Not Available | Negative | 3999433 - 4000563 | 42083.4 |
| putative udp-glucose 6-dehydrogenase, tuad-like | CK234_03254 | Not Available | Positive | 4000682 - 4001995 | 48150.3 |
| protein of unknown function (duf4738) | CK234_03255 | Not Available | Positive | 4002019 - 4002807 | 29405.2 |
| hypothetical protein | CK234_03256 | Not Available | Positive | 4002857 - 4003132 | 10175.2 |
| putative dead-box atp-dependent rna helicase, csha-like | CK234_03257 | Not Available | Negative | 4003518 - 4004795 | 47461.1 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

