Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type i secretion outer membrane protein, tolc family-like | CK234_03238 | Not Available | Positive | 3984872 - 3986179 | 50664.0 |
| putative macrolide export protein, maca-like | CK234_03239 | Not Available | Positive | 3986185 - 3987435 | 47799.6 |
| putative macrolide export atp-binding/permease protein, macb-like | CK234_03240 | Not Available | Positive | 3987451 - 3988161 | 26379.0 |
| putative macrolide export atp-binding/permease protein, macb-like | CK234_03241 | Not Available | Positive | 3988158 - 3990581 | 91932.5 |
| hypothetical protein | CK234_03242 | Not Available | Negative | 3992019 - 3992324 | 10691.7 |
| phage integrase sam-like domain protein | CK234_03243 | Not Available | Positive | 3992458 - 3993129 | 26087.3 |
| hypothetical protein | CK234_03244 | Not Available | Negative | 3993119 - 3993871 | 26781.6 |
| hypothetical protein | CK234_03245 | Not Available | Positive | 3994278 - 3994529 | 9377.15 |
| hypothetical protein | CK234_03246 | Not Available | Positive | 3995285 - 3995539 | 9752.07 |
| protein of unknown function (duf1622) | CK234_03247 | Not Available | Negative | 3995664 - 3996005 | 12539.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

