Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 3977778 - 3977850 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3977898 - 3977981 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3978002 - 3978088 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3978102 - 3978174 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3978222 - 3978305 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3978318 - 3978393 | Not Available |
| glutamine synthetase | CK234_03234 | Not Available | Negative | 3978514 - 3980016 | 56020.0 |
| (r)-stereoselective amidase | CK234_03235 | Not Available | Positive | 3980222 - 3981754 | 59330.0 |
| putative sensor protein kinase, walk-like | CK234_03236 | Not Available | Negative | 3981881 - 3983203 | 50256.6 |
| putative transcriptional regulatory protein, zrar-like | CK234_03237 | Not Available | Negative | 3983209 - 3984540 | 50256.9 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

