Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-iminoacetate synthase | CK234_03218 | Not Available | Negative | 3967262 - 3968392 | 43251.8 |
| iron-sulfur flavoprotein | CK234_03219 | Not Available | Negative | 3968481 - 3969053 | 21328.5 |
| hypothetical protein | CK234_03220 | Not Available | Negative | 3969053 - 3969568 | 19574.8 |
| phosphomethylpyrimidine synthase | CK234_03221 | Not Available | Negative | 3969590 - 3971290 | 63475.9 |
| thiazole synthase | CK234_03222 | Not Available | Negative | 3971299 - 3972072 | 27519.5 |
| thiamine-phosphate synthase | CK234_03223 | Not Available | Negative | 3972090 - 3972716 | 23065.1 |
| putative sulfur carrier protein, this-like | CK234_03224 | Not Available | Negative | 3972706 - 3972906 | 7153.82 |
| superoxide dismutase (mn/fe) | CK234_03225 | Not Available | Negative | 3973292 - 3973909 | 23314.6 |
| putative atp-dependent dna helicase, pcra-like | CK234_03226 | Not Available | Positive | 3974018 - 3976408 | 91472.8 |
| carboxynorspermidine/carboxyspermidine decarboxylase | CK234_03227 | Not Available | Positive | 3976441 - 3977604 | 44398.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

