Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative thiol-disulfide oxidoreductase, resa-like | CK234_03208 | Not Available | Negative | 3956885 - 3958003 | 41334.4 |
| putative spermidine/putrescine import atp-binding protein, pota-like | CK234_03209 | Not Available | Positive | 3958505 - 3959893 | 51886.3 |
| putative spermidine/putrescine transport system permease protein, potb-like | CK234_03210 | Not Available | Positive | 3959906 - 3960703 | 29515.9 |
| putative inner membrane abc transporter permease protein, ydcv-like | CK234_03211 | Not Available | Positive | 3960697 - 3961488 | 28734.3 |
| spermidine/putrescine-binding periplasmic protein precursor | CK234_03212 | Not Available | Positive | 3961516 - 3962826 | 50297.2 |
| ribose-phosphate pyrophosphokinase | CK234_03213 | Not Available | Negative | 3962956 - 3963894 | 34190.5 |
| thiamine-phosphate pyrophosphorylase | CK234_03214 | Not Available | Negative | 3964059 - 3964667 | 22964.7 |
| hypothetical protein | CK234_03215 | Not Available | Positive | 3964887 - 3965240 | 12947.3 |
| putative acid--amine ligase, ygic-like | CK234_03216 | Not Available | Positive | 3965253 - 3966377 | 43012.5 |
| putative adenylyltransferase/sulfurtransferase, moez-like | CK234_03217 | Not Available | Negative | 3966490 - 3967182 | 25401.8 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

