Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 3951339 - 3951421 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 3951462 - 3951538 | Not Available |
| ribosome hibernation promoting factor | CK234_03200 | Not Available | Negative | 3951637 - 3951936 | 11353.7 |
| putative tyrosine recombinase, xerc-like | CK234_03201 | Not Available | Negative | 3951951 - 3952832 | 33990.5 |
| 30s ribosomal protein s21 | CK234_03202 | Not Available | Negative | 3952910 - 3953101 | 7526.36 |
| putative peptidase | CK234_03203 | Not Available | Positive | 3953270 - 3955051 | 66815.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferase | CK234_03204 | Not Available | Positive | 3955061 - 3955585 | 18518.4 |
| outer membrane protein beta-barrel domain protein | CK234_03205 | Not Available | Positive | 3955631 - 3956122 | 18009.4 |
| acetyltransferase (gnat) domain protein | CK234_03206 | Not Available | Positive | 3956236 - 3956553 | 12132.6 |
| hypothetical protein | CK234_03207 | Not Available | Negative | 3956691 - 3956849 | 5974.12 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

