Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | CK234_03188 | Not Available | Negative | 3946844 - 3947218 | 12654.2 |
| 50s ribosomal protein l10 | CK234_03189 | Not Available | Negative | 3947265 - 3947783 | 18678.8 |
| 50s ribosomal protein l1 | CK234_03190 | Not Available | Negative | 3947799 - 3948497 | 24935.6 |
| 50s ribosomal protein l11 | CK234_03191 | Not Available | Negative | 3948513 - 3948956 | 15797.5 |
| putative transcription termination/antitermination protein, nusg-like | CK234_03192 | Not Available | Negative | 3949017 - 3949559 | 20170.3 |
| preprotein translocase, sece subunit, bacterial | CK234_03193 | Not Available | Negative | 3949573 - 3949767 | 7402.06 |
| Trna-trp | Not Available | Not Available | Positive | 3949781 - 3949856 | Not Available |
| elongation factor tu | CK234_03195 | Not Available | Negative | 3949914 - 3951098 | 43565.6 |
| Trna-thr | Not Available | Not Available | Positive | 3951150 - 3951221 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3951233 - 3951305 | Not Available |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

