Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase 3 | CK234_00285 | Not Available | Negative | 360919 - 362688 | 66618.8 |
| protein of unknown function (duf4099) | CK234_00286 | Not Available | Negative | 362762 - 363031 | 9902.04 |
| protein of unknown function (duf3945) | CK234_00287 | Not Available | Negative | 363086 - 364921 | 69732.9 |
| putative tyrosine recombinase, xerd-like | CK234_00288 | Not Available | Positive | 365775 - 366998 | 47070.5 |
| putative transcription termination/antitermination factor, nusg-like | CK234_00289 | Not Available | Positive | 367493 - 368041 | 21294.2 |
| putative undecaprenyl-phosphate n-acetylglucosaminyl 1-phosphate transferase | CK234_00290 | Not Available | Positive | 368066 - 369172 | 41886.2 |
| putative polysaccharide export protein, epse-like | CK234_00291 | Not Available | Positive | 369199 - 369993 | 29399.8 |
| ptk-like tyrosine kinase protein | CK234_00292 | Not Available | Positive | 370035 - 372413 | 89241.5 |
| putative tyrosine-protein phosphatase, cpsb-like | CK234_00293 | Not Available | Positive | 372427 - 373131 | 27393.6 |
| udp-n-acetyl-d-glucosamine 6-dehydrogenase | CK234_00294 | Not Available | Positive | 373213 - 374418 | 44688.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

