Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase | CK234_03148 | Not Available | Positive | 3913658 - 3914608 | 37224.4 |
| putative membrane protein | CK234_03149 | Not Available | Positive | 3914605 - 3915606 | 37585.2 |
| putative flavin mononucleotide phosphatase, yigb-like | CK234_03150 | Not Available | Positive | 3915611 - 3916333 | 27105.8 |
| l-fucose-proton symporter | CK234_03151 | Not Available | Positive | 3916340 - 3917539 | 44345.3 |
| putative sugar kinase, ydjh-like | CK234_03152 | Not Available | Negative | 3917593 - 3918489 | 33171.6 |
| myo-inositol-1-phosphate synthase | CK234_03153 | Not Available | Positive | 3918625 - 3919932 | 48823.8 |
| hypothetical protein | CK234_03154 | Not Available | Positive | 3920831 - 3921244 | 14889.9 |
| 30s ribosomal protein s4 | CK234_03155 | Not Available | Negative | 3921273 - 3921878 | 22540.2 |
| 30s ribosomal protein s11 | CK234_03156 | Not Available | Negative | 3921995 - 3922384 | 13878.8 |
| 30s ribosomal protein s13 | CK234_03157 | Not Available | Negative | 3922396 - 3922776 | 14121.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

