Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s1 | CK234_03128 | Not Available | Negative | 3893085 - 3894881 | 67091.1 |
| hypothetical protein | CK234_03129 | Not Available | Positive | 3895078 - 3895317 | 9421.54 |
| protein of unknown function (duf541) | CK234_03130 | Not Available | Negative | 3895407 - 3896108 | 26282.6 |
| n-acetylmuramic acid 6-phosphate etherase | CK234_03131 | Not Available | Negative | 3896112 - 3896948 | 30438.0 |
| badf/badg/bcra/bcrd atpase family protein | CK234_03132 | Not Available | Negative | 3896945 - 3897784 | 30757.1 |
| putative transcriptional regulatory protein, yeht-like | CK234_03133 | Not Available | Negative | 3897940 - 3898725 | 30188.5 |
| putative sensor histidine kinase, yehu-like | CK234_03134 | Not Available | Negative | 3898718 - 3899863 | 44367.3 |
| outer membrane protein beta-barrel domain protein | CK234_03135 | Not Available | Negative | 3899878 - 3900516 | 24647.5 |
| protein of unknown function (duf4136) | CK234_03136 | Not Available | Negative | 3900529 - 3901161 | 24210.4 |
| protein of unknown function (duf4251) | CK234_03137 | Not Available | Negative | 3901187 - 3901744 | 20164.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

