Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative imidazole glycerol phosphate synthase subunit, hisf-like | CK234_03098 | Not Available | Positive | 3857710 - 3858465 | 27219.5 |
| phosphoribosyl-atp pyrophosphatase | CK234_03099 | Not Available | Positive | 3858630 - 3859241 | 23137.6 |
| putative cell division atp-binding protein, ftse-like | CK234_03100 | Not Available | Positive | 3859246 - 3860001 | 28405.2 |
| lysine-sensitive aspartokinase 3 | CK234_03101 | Not Available | Positive | 3860109 - 3861428 | 49296.1 |
| diaminopimelate decarboxylase | CK234_03102 | Not Available | Positive | 3861536 - 3862696 | 42734.4 |
| hypothetical protein | CK234_03103 | Not Available | Negative | 3862761 - 3863267 | 19772.7 |
| putative hopanoid biosynthesis associated glycosyl transferase protein, hpni-like | CK234_03104 | Not Available | Positive | 3863472 - 3864629 | 44788.3 |
| putative monooxygenase, ycne-like | CK234_03105 | Not Available | Positive | 3864678 - 3864953 | 10430.6 |
| hypothetical protein | CK234_03106 | Not Available | Positive | 3865510 - 3865797 | 10298.2 |
| hypothetical protein | CK234_03107 | Not Available | Negative | 3866245 - 3866424 | 6424.94 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

